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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T PMM1 chr22:41972898-41985894:- 0.6 6.93 1.35E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T POLDIP3 chr22:42979727-43010968:- 0.64 7.4 5.99E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T POLR2F chr22:38348614-38437922:+ 0.57 8.02 7.97E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T POLR3H chr22:41921808-41940610:- 0.91 10.08 8.75E-22 Box Plot
THCA rs5998366 chr22:32665525 C/T PPARA chr22:46546424-46639653:+ 0.46 5.94 5.35E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T PPIL2 chr22:22020298-22054304:+ 0.69 7.5 3.05E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T PPPDE2 chr22:41996936-42016916:- 0.48 6.33 5.73E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T RABL2B chr22:51205929-51222091:- 0.62 6.65 7.83E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T RANBP1 chr22:20103461-20114880:+ 0.62 7.25 1.73E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T RANGAP1 chr22:41641615-41682255:- 0.51 6.21 1.12E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T RBM9 chr22:36134784-36424585:- 0.5 7.12 3.94E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T RBX1 chr22:41347351-41369313:+ 0.66 10.19 3.36E-22 Box Plot
THCA rs5998366 chr22:32665525 C/T RHBDD3 chr22:29655841-29664198:- 0.68 8.68 6.06E-17 Box Plot
THCA rs5998366 chr22:32665525 C/T RNF185 chr22:31556169-31603005:+ 0.83 8.86 1.6E-17 Box Plot
THCA rs5998366 chr22:32665525 C/T RNF215 chr22:30764800-30817760:- 0.78 9.31 4.61E-19 Box Plot